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Making Sense of Evolution
The Conceptual Foundations of Evolutionary Biology
Massimo Pigliucci and Jonathan Kaplan
University of Chicago Press, 2006

Making Sense of Evolution explores contemporary evolutionary biology, focusing on the elements of theories—selection, adaptation, and species—that are complex and open to multiple possible interpretations, many of which are incompatible with one another and with other accepted practices in the discipline. Particular experimental methods, for example, may demand one understanding of “selection,” while the application of the same concept to another area of evolutionary biology could necessitate a very different definition.

Spotlighting these conceptual difficulties and presenting alternate theoretical interpretations that alleviate this incompatibility, Massimo Pigliucci and Jonathan Kaplan intertwine scientific and philosophical analysis to produce a coherent picture of evolutionary biology. Innovative and controversial, Making Sense of Evolution encourages further development of the Modern Synthesis and outlines what might be necessary for the continued refinement of this evolving field.

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The Meaning of Evolution
The Morphological Construction and Ideological Reconstruction of Darwin's Theory
Robert J. Richards
University of Chicago Press, 1992
Did Darwin see evolution as progressive, directed toward producing ever more advanced forms of life? Most contemporary scholars say no. In this challenge to prevailing views, Robert J. Richards says yes—and argues that current perspectives on Darwin and his theory are both ideologically motivated and scientifically unsound.

This provocative new reading of Darwin goes directly to the origins of evolutionary theory. Unlike most contemporary biologists or historians and philosophers of science, Richards holds that Darwin did concern himself with the idea of progress, or telos, as he constructed his theory. Richards maintains that Darwin drew on the traditional embryological meanings of the terms "evolution" and "descent with modification." In the 1600s and 1700s, "evolution" referred to the embryological theory of preformation, the idea that the embryo exists as a miniature adult of its own species that simply grows, or evolves, during gestation. By the early 1800s, however, the idea of preformation had become the concept of evolutionary recapitulation, the idea that during its development an embryo passes through a series of stages, each the adult form of an ancestor species.

Richards demonstrates that, for Darwin, embryological recapitulation provided a graphic model of how species evolve. If an embryo could be seen as successively taking the structures and forms of its ancestral species, then one could see the evolution of life itself as a succession of species, each transformed from its ancestor. Richards works with the Origin and other published and archival material to show that these embryological models were much on Darwin's mind as he considered the evidence for descent with modification.

Why do so many modern researchers find these embryological roots of Darwin's theory so problematic? Richards argues that the current tendency to see evolution as a process that is not progressive and not teleological imposes perspectives on Darwin that incorrectly deny the clearly progressive heart of his embryological models and his evolutionary theory.
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The Mermaid’s Tale
Four Billion Years of Cooperation in the Making of Living Things
Kenneth M. Weiss and Anne V. Buchanan
Harvard University Press, 2009

Even after 150 years, Darwin’s theory of evolution by natural selection is irresistibly compelling. But how can this idea—in which competition prevails—be consistent with all that we know about the thoroughly cooperative nature of life at the genetic and cellular level? This book reconciles these discrepancies.

Assembling a set of general principles, authors Kenneth Weiss and Anne Buchanan build a comprehensive, unified theory that applies on the evolutionary time scale but also on the developmental and ecological scales where daily life is lived, and cells, organisms, and species interact. They present this story through a diversity of examples spanning the fundamental challenges that organisms have faced throughout the history of life. This shows that even very complex traits can be constructed simply, based on these principles. Although relentless competitive natural selection is widely assumed to be the primary mover of evolutionary change, The Mermaid’s Tale shows how life more generally works on the basis of cooperation. The book reveals that the focus on competition and cooperation is largely an artifact of the compression of time—a distortion that dissolves when the nature and origins of adapted life are viewed primarily from developmental and evolutionary time scales.

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Metaphysics, Materialism, and the Evolution of Mind
The Early Writings of Charles Darwin
Charles Darwin
University of Chicago Press, 1980

First published in 1974 as a companion volume to Darwin on Man by Howard E. Gruber, Paul Barrett’s transcriptions of Darwin’s M and N notebooks served to shed new light on the evolutionist’s methods and motivation.

According to Stephen Jay Gould in the New York Times Book Review, “Darwin kept [these notebooks] primarily in 1838, when he was 29 years old. In them, he recorded his early conviction of evolutionary continuity between humans and all other animals. . . . These notebooks display all the features of humanistic intellect that his detractors denied. We find erudition in his comments on Plato, Locke, Hume, Adam Smith, Whewell, Burke, Montaigne, Lessing and Spencer. . . . We appreciate an artistic bent in his delight with nature and her prophet Wordsworth. . . . We grasp the breadth of his bold attempt to clothe all human thought and behaviour in a new evolutionary garb. . . . Charles Darwin was reconstructing the world and he knew exactly what he was doing.” 

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Mimicry and the Evolutionary Process
Edited by Lincoln P. Brower
University of Chicago Press, 1989

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Modularity in Development and Evolution
Edited by Gerhard Schlosser and Günter P. Wagner
University of Chicago Press, 2004
Modularity in Development and Evolution offers the first sustained exploration of modules from developmental and evolutionary perspectives. Contributors discuss what modularity is, how it can be identified and modeled, how it originated and evolved, and its biological significance. Covering modules at levels ranging from genes to colonies, the book focuses on their roles not just in structures but also in processes such as gene regulation. Among many exciting findings, the contributors demonstrate how modules can highlight key constraints on evolutionary processes.

A timely synthesis of a crucial topic, Modularity in Development and Evolution shows the invaluable insights modules can give into both developmental complexities and their evolutionary origins.
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Monad to Man
The Concept of Progress in Evolutionary Biology
Michael Ruse
Harvard University Press, 1996

The idea of evolution: it fascinates some of us, disturbs others, and leaves only a very few people indifferent. In a major new interpretation of evolutionary theory, Michael Ruse pinpoints the common source of this attraction and discomfort. A renowned writer on evolutionary theory and its history, Ruse has long been sensitive to the fact that many people--and not simply religious enthusiasts--find something deeply troubling about much of what passes for science in evolutionary circles. What causes this tension, he finds in his search of evolutionism's 250-year history, is the intimate relationship between evolution and the secular ideology of progress.

Ubiquitous in Darwin's time, the idea of an unceasing improvement in life insinuated its way into evolutionary theory from the first. In interviews with today's major figures in evolutionary biology--including Stephen Jay Gould, Edward O. Wilson, Ernst Mayr, and John Maynard Smith--and in an intimate look at the discoveries and advances in the history and philosophy of science, Ruse finds this belief just as prevalent today--however it might be denied or obscured. His book traces the delicate line between those who argue that science is and must be objective and those who deem science a "social construction" in the fashion of religion or the rest of culture. It offers an unparalleled account of evolutionary theory, from popular books to museums to the most complex theorizing, at a time when its status as science is under greater scrutiny than ever before.

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Monkey Trials and Gorilla Sermons
Evolution and Christianity from Darwin to Intelligent Design
Peter J. Bowler
Harvard University Press, 2009

From the beginning, Darwin’s dangerous idea has been a snake in the garden, denounced from pulpits then and now as incompatible with the central tenets of Christian faith. Recovered here is the less well-known but equally long history of thoughtful engagement and compromise on the part of liberal theologians. Peter J. Bowler doesn’t minimize the hostility of many of the faithful toward evolution, but he reveals the existence of a long tradition within the churches that sought to reconcile Christian beliefs with evolution by finding reflections of the divine in scientific explanations for the origin of life. By tracing the historical forerunners of these rival Christian responses, Bowler provides a valuable alternative to accounts that stress only the escalating confrontation.

Our polarized society, Bowler says, has all too often projected its rivalries onto the past, concealing the efforts by both scientists and theologians to find common ground. Our perception of past confrontations has been shaped by an oversimplified model of a “war” between science and religion. By uncovering the complexity of the debates sparked by Darwin’s theory, we might discover ways to depolarize our own debates about where we came from and why we are here.

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The Moral Meaning of Nature
Nietzsche’s Darwinian Religion and Its Critics
Peter J. Woodford
University of Chicago Press, 2018
What, if anything, does biological evolution tell us about the nature of religion, ethical values, or even the meaning and purpose of life? The Moral Meaning of Nature sheds new light on these enduring questions by examining the significance of an earlier—and unjustly neglected—discussion of Darwin in late nineteenth-century Germany.
 
We start with Friedrich Nietzsche, whose writings staged one of the first confrontations with the Christian tradition using the resources of Darwinian thought. The lebensphilosophie, or “life-philosophy,” that arose from his engagement with evolutionary ideas drew responses from other influential thinkers, including Franz Overbeck, Georg Simmel, and Heinrich Rickert. These critics all offered cogent challenges to Nietzsche’s appropriation of the newly transforming biological sciences, his negotiation between science and religion, and his interpretation of the implications of Darwinian thought. They also each proposed alternative ways of making sense of Nietzsche’s unique question concerning the meaning of biological evolution “for life.” At the heart of the discussion were debates about the relation of facts and values, the place of divine purpose in the understanding of nonhuman and human agency, the concept of life, and the question of whether the sciences could offer resources to satisfy the human urge to discover sources of value in biological processes. The Moral Meaning of Nature focuses on the historical background of these questions, exposing the complex ways in which they recur in contemporary philosophical debate.
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Morphological Integration
Everett C. Olson and Robert L. Miller
University of Chicago Press, 1999
Despite recent advances in genetics, development, anatomy, systematics, and morphometrics, the synthesis of ideas and research agenda put forth in the classic Morphological Integration remains remarkably fresh, timely, and relevant. Pioneers in reexamining morphology, Everett Olson and Robert Miller were among the first to explore the concept of the integrated organism in both living and extinct populations. In a new foreword and afterword, biologists Barry Chernoff and Paul Magwene summarize the landmark achievements made by Olson and Miller and bring matters discussed in the book up to date, suggest new methods, and accentuate the importance of continued research in morphological integration.

Everett C. Olson was a professor at the University of Chicago and at the University of California, Los Angeles. He was a former president of the Society of Vertebrate Paleontology. Robert L. Miller was associate professor of geology at the University of Chicago, associate scientist in marine geology at the Woods Hole Oceanographic Institution, and a member of the board of editors of the Journal of Geology.
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Mystery of Mysteries
Is Evolution a Social Construction?
Michael Ruse
Harvard University Press, 1999

With the recent Sokal hoax--the publication of a prominent physicist's pseudo-article in a leading journal of cultural studies--the status of science moved sharply from debate to dispute. Is science objective, a disinterested reflection of reality, as Karl Popper and his followers believed? Or is it subjective, a social construction, as Thomas Kuhn and his students maintained? Into the fray comes Mystery of Mysteries, an enlightening inquiry into the nature of science, using evolutionary theory as a case study.

Michael Ruse begins with such colorful luminaries as Erasmus Darwin (grandfather of Charles) and Julian Huxley (brother of novelist Aldous and grandson of T. H. Huxley, "Darwin's bulldog" ) and ends with the work of the English game theorist Geoffrey Parker--a microevolutionist who made his mark studying the mating strategies of dung flies--and the American paleontologist Jack Sepkoski, whose computer-generated models reconstruct mass extinctions and other macro events in life's history. Along the way Ruse considers two great popularizers of evolution, Richard Dawkins and Stephen Jay Gould, as well as two leaders in the field of evolutionary studies, Richard Lewontin and Edward O. Wilson, paying close attention to these figures' cultural commitments: Gould's transplanted Germanic idealism, Dawkins's male-dominated Oxbridge circle, Lewontin's Jewish background, and Wilson's southern childhood. Ruse explicates the role of metaphor and metavalues in evolutionary thought and draws significant conclusions about the cultural impregnation of science. Identifying strengths and weaknesses on both sides of the "science wars," he demonstrates that a resolution of the objective and subjective debate is nonetheless possible.

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